STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ93571.1Haem-NO-binding. (180 aa)    
Predicted Functional Partners:
SHJ93603.1
PAS/PAC sensor signal transduction histidine kinase.
 
     0.952
SHJ93693.1
Hypothetical protein.
 
     0.949
SHJ92700.1
Radical SAM superfamily enzyme YgiQ, UPF0313 family.
  
 
 0.941
SHJ93632.1
Uncharacterized conserved protein, contains FIST_N domain.
 
   
 0.920
SHJ93662.1
Signal transduction histidine kinase.
 
     0.915
SHJ93724.1
Two component transcriptional regulator, LytTR family.
 
     0.821
SHJ93543.1
Response regulator receiver domain-containing protein.
 
     0.742
SHJ93816.1
Flp pilus assembly protein TadD, contains TPR repeats.
  
     0.695
SHJ93993.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.666
SHJ93846.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.665
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.