STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK13277.1Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (578 aa)    
Predicted Functional Partners:
SHK13333.1
GlcNAc-PI de-N-acetylase.
 
     0.896
SHK13249.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
  
  0.781
SHK13221.1
Protein of unknown function.
  
     0.687
SHK15098.1
L-proline dehydrogenase.
  
  
 0.593
SHK45690.1
Protein of unknown function; Non-canonical start codon; manually curated.
  
     0.582
SHK17992.1
Protein of unknown function.
  
     0.541
SHK16887.1
Hpt domain-containing protein.
     
 0.533
SHJ91689.1
Protein of unknown function.
  
     0.524
SHJ83066.1
Protein of unknown function.
  
     0.509
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.449
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.