Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK16458.1 | SHK16485.1 | SAMN04488007_2221 | SAMN04488007_2222 | ZipA, C-terminal FtsZ-binding domain; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | Hypothetical protein. | 0.603 |
SHK16485.1 | SHK16458.1 | SAMN04488007_2222 | SAMN04488007_2221 | Hypothetical protein. | ZipA, C-terminal FtsZ-binding domain; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | 0.603 |
SHK16485.1 | SHK16512.1 | SAMN04488007_2222 | SAMN04488007_2223 | Hypothetical protein. | Hypothetical protein. | 0.416 |
SHK16485.1 | SHK17161.1 | SAMN04488007_2222 | SAMN04488007_2249 | Hypothetical protein. | Helicase conserved C-terminal domain-containing protein. | 0.489 |
SHK16485.1 | SHK18664.1 | SAMN04488007_2222 | SAMN04488007_2301 | Hypothetical protein. | Helicase conserved C-terminal domain-containing protein. | 0.424 |
SHK16485.1 | SHK62416.1 | SAMN04488007_2222 | SAMN04488007_3428 | Hypothetical protein. | OmpA family protein. | 0.444 |
SHK16512.1 | SHK16485.1 | SAMN04488007_2223 | SAMN04488007_2222 | Hypothetical protein. | Hypothetical protein. | 0.416 |
SHK17161.1 | SHK16485.1 | SAMN04488007_2249 | SAMN04488007_2222 | Helicase conserved C-terminal domain-containing protein. | Hypothetical protein. | 0.489 |
SHK18664.1 | SHK16485.1 | SAMN04488007_2301 | SAMN04488007_2222 | Helicase conserved C-terminal domain-containing protein. | Hypothetical protein. | 0.424 |
SHK62416.1 | SHK16485.1 | SAMN04488007_3428 | SAMN04488007_2222 | OmpA family protein. | Hypothetical protein. | 0.444 |