STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK16593.1Signal transduction histidine kinase. (498 aa)    
Predicted Functional Partners:
SHK16887.1
Hpt domain-containing protein.
 
0.990
SHJ87452.1
PAS domain S-box-containing protein.
  
0.988
SHJ88205.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.985
SHK16618.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.984
SHJ85679.1
Signal transduction histidine kinase.
 
0.969
SHK65733.1
Signal transduction histidine kinase.
  
0.965
SHK34807.1
Signal transduction histidine kinase.
 
0.962
SHJ46748.1
Signal transduction histidine kinase.
 
0.960
SHJ63670.1
Signal transduction histidine kinase.
 
0.959
SHK28983.1
Type IV pili methyl-accepting chemotaxis transducer N-term.
 
 
 0.956
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.