STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK17244.13-hydroxyisobutyrate dehydrogenase. (293 aa)    
Predicted Functional Partners:
SHK31150.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.801
SHJ37136.1
4-carboxymuconolactone decarboxylase.
  
 
 0.706
SHK24419.1
FAD/FMN-containing dehydrogenase.
    
  0.685
SHK57504.1
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.
  
 
 0.679
SHK17137.1
Glyoxylate/hydroxypyruvate reductase A.
 
  
  0.660
SHJ64367.1
Hydroxypyruvate isomerase.
  
 
 0.571
SHK45042.1
Hydroxypyruvate isomerase.
  
 
 0.571
SHK17218.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.556
SHJ66915.1
propionyl-CoA carboxylase beta chain.
    
  0.550
SHK61859.1
Acetyl-CoA carboxylase, carboxyltransferase component.
    
  0.550
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.