STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK17788.1NAD(P)H dehydrogenase (quinone). (285 aa)    
Predicted Functional Partners:
SHJ88791.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
   
 0.933
SHJ42046.1
4Fe-4S binding domain-containing protein.
   
 0.888
SHK14434.1
4Fe-4S dicluster domain-containing protein.
   
 0.888
SHJ71203.1
Amino acid adenylation domain-containing protein.
   
 0.804
SHJ77506.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase.
   
  0.800
SHK75065.1
Deoxyadenosine/deoxycytidine kinase.
   
  0.800
SHJ76049.1
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
    
  0.784
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.780
SHK23776.1
Acyl carrier protein.
   
 0.780
SHK65533.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
 
 
  0.779
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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