STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK20679.1Enoyl-CoA hydratase/carnithine racemase. (281 aa)    
Predicted Functional Partners:
SHK16887.1
Hpt domain-containing protein.
    
 0.926
SHJ63670.1
Signal transduction histidine kinase.
    
 0.884
SHK28983.1
Type IV pili methyl-accepting chemotaxis transducer N-term.
    
 0.884
SHK79568.1
Signal transduction histidine kinase.
    
 0.884
SHJ37225.1
3-oxoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.875
SHK31183.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.875
SHK41425.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.875
SHK65205.1
Acyl-CoA dehydrogenase.
 
  0.859
SHK76679.1
Acyl-CoA dehydrogenase.
 
  0.850
SHJ72529.1
glutaryl-CoA dehydrogenase.
 
  0.843
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.