STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK22043.1Multimeric flavodoxin WrbA. (244 aa)    
Predicted Functional Partners:
SHK22070.1
Hypothetical protein.
       0.773
SHK31306.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
   
    0.761
SHK22020.1
Pyruvate dehydrogenase (quinone); Belongs to the TPP enzyme family.
  
    0.640
SHK43365.1
LysM domain-containing protein.
   
  
 0.575
SHK23126.1
Luciferase-type oxidoreductase, BA3436 family.
  
  
  0.551
SHK65533.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
 
  
 0.522
SHJ54916.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.504
SHK20551.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.504
SHK37388.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.504
SHK20849.1
Kef-type potassium/proton antiporter accessory protein, CPA2 family (TC 2.A.37.1).
    
 0.492
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.