STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK22395.1Formate/nitrite transporter FocA, FNT family. (283 aa)    
Predicted Functional Partners:
SHJ75856.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
  
 
 0.703
SHJ51640.1
Carbonic anhydrase.
  
    0.690
SHK31925.1
Carbonic anhydrase.
  
    0.690
SHJ55317.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.602
SHK41290.1
Rieske [2Fe-2S] domain-containing protein.
  
  
 0.518
SHJ72646.1
Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.506
SHJ55281.1
Rubredoxin.
    
 0.471
SHK24419.1
FAD/FMN-containing dehydrogenase.
 
   
 0.471
SHK76714.1
Glutamate synthase (NADH) large subunit.
   
  
 0.453
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.