Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK25921.1 | SHK25954.1 | SAMN04488007_2552 | SAMN04488007_2553 | Two component transcriptional regulator, LytTR family. | Hypothetical protein. | 0.484 |
SHK25921.1 | SHK25977.1 | SAMN04488007_2552 | SAMN04488007_2554 | Two component transcriptional regulator, LytTR family. | Signal transduction histidine kinase. | 0.454 |
SHK25921.1 | SHK26013.1 | SAMN04488007_2552 | SAMN04488007_2555 | Two component transcriptional regulator, LytTR family. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.431 |
SHK25954.1 | SHK25921.1 | SAMN04488007_2553 | SAMN04488007_2552 | Hypothetical protein. | Two component transcriptional regulator, LytTR family. | 0.484 |
SHK25954.1 | SHK25977.1 | SAMN04488007_2553 | SAMN04488007_2554 | Hypothetical protein. | Signal transduction histidine kinase. | 0.536 |
SHK25954.1 | SHK26013.1 | SAMN04488007_2553 | SAMN04488007_2555 | Hypothetical protein. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.454 |
SHK25977.1 | SHK25921.1 | SAMN04488007_2554 | SAMN04488007_2552 | Signal transduction histidine kinase. | Two component transcriptional regulator, LytTR family. | 0.454 |
SHK25977.1 | SHK25954.1 | SAMN04488007_2554 | SAMN04488007_2553 | Signal transduction histidine kinase. | Hypothetical protein. | 0.536 |
SHK25977.1 | SHK26013.1 | SAMN04488007_2554 | SAMN04488007_2555 | Signal transduction histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.963 |
SHK26013.1 | SHK25921.1 | SAMN04488007_2555 | SAMN04488007_2552 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Two component transcriptional regulator, LytTR family. | 0.431 |
SHK26013.1 | SHK25954.1 | SAMN04488007_2555 | SAMN04488007_2553 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Hypothetical protein. | 0.454 |
SHK26013.1 | SHK25977.1 | SAMN04488007_2555 | SAMN04488007_2554 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Signal transduction histidine kinase. | 0.963 |