Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ51463.1 | SHK26804.1 | SAMN04488007_0576 | SAMN04488007_2577 | TPR repeat-containing protein. | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. | 0.627 |
SHJ59774.1 | SHJ60284.1 | SAMN04488007_0830 | SAMN04488007_0847 | Protein involved in gliding motility SprE; Manually curated. | Hypothetical protein. | 0.618 |
SHJ59774.1 | SHJ69872.1 | SAMN04488007_0830 | SAMN04488007_1140 | Protein involved in gliding motility SprE; Manually curated. | Tetratricopeptide repeat-containing protein. | 0.565 |
SHJ59774.1 | SHK26804.1 | SAMN04488007_0830 | SAMN04488007_2577 | Protein involved in gliding motility SprE; Manually curated. | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. | 0.669 |
SHJ60284.1 | SHJ59774.1 | SAMN04488007_0847 | SAMN04488007_0830 | Hypothetical protein. | Protein involved in gliding motility SprE; Manually curated. | 0.618 |
SHJ60284.1 | SHJ69872.1 | SAMN04488007_0847 | SAMN04488007_1140 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.510 |
SHJ60284.1 | SHK26804.1 | SAMN04488007_0847 | SAMN04488007_2577 | Hypothetical protein. | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. | 0.627 |
SHJ69872.1 | SHJ59774.1 | SAMN04488007_1140 | SAMN04488007_0830 | Tetratricopeptide repeat-containing protein. | Protein involved in gliding motility SprE; Manually curated. | 0.565 |
SHJ69872.1 | SHJ60284.1 | SAMN04488007_1140 | SAMN04488007_0847 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.510 |
SHJ69872.1 | SHK26804.1 | SAMN04488007_1140 | SAMN04488007_2577 | Tetratricopeptide repeat-containing protein. | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. | 0.646 |
SHJ79064.1 | SHK26804.1 | SAMN04488007_1445 | SAMN04488007_2577 | Hypothetical protein. | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. | 0.662 |
SHK26701.1 | SHK26770.1 | SAMN04488007_2574 | SAMN04488007_2576 | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. | YbbR-like protein. | 0.604 |
SHK26701.1 | SHK26804.1 | SAMN04488007_2574 | SAMN04488007_2577 | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. | 0.658 |
SHK26701.1 | SHK26846.1 | SAMN04488007_2574 | SAMN04488007_2578 | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. | Enoyl-[acyl-carrier-protein] reductase [NADH]. | 0.464 |
SHK26701.1 | coaE | SAMN04488007_2574 | SAMN04488007_2575 | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.611 |
SHK26770.1 | SHK26701.1 | SAMN04488007_2576 | SAMN04488007_2574 | YbbR-like protein. | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. | 0.604 |
SHK26770.1 | SHK26804.1 | SAMN04488007_2576 | SAMN04488007_2577 | YbbR-like protein. | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. | 0.799 |
SHK26770.1 | SHK26846.1 | SAMN04488007_2576 | SAMN04488007_2578 | YbbR-like protein. | Enoyl-[acyl-carrier-protein] reductase [NADH]. | 0.648 |
SHK26770.1 | coaE | SAMN04488007_2576 | SAMN04488007_2575 | YbbR-like protein. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.828 |
SHK26804.1 | SHJ51463.1 | SAMN04488007_2577 | SAMN04488007_0576 | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. | TPR repeat-containing protein. | 0.627 |
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