Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ56807.1 | SHJ63670.1 | SAMN04488007_0741 | SAMN04488007_0950 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SHJ56807.1 | SHJ87452.1 | SAMN04488007_0741 | SAMN04488007_1771 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.922 |
SHJ56807.1 | SHJ88181.1 | SAMN04488007_0741 | SAMN04488007_1799 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.710 |
SHJ56807.1 | SHJ88205.1 | SAMN04488007_0741 | SAMN04488007_1800 | PAS domain S-box-containing protein. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.977 |
SHJ56807.1 | SHK16887.1 | SAMN04488007_0741 | SAMN04488007_2238 | PAS domain S-box-containing protein. | Hpt domain-containing protein. | 0.999 |
SHJ56807.1 | SHK33801.1 | SAMN04488007_0741 | SAMN04488007_2790 | PAS domain S-box-containing protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.694 |
SHJ56807.1 | SHK33842.1 | SAMN04488007_0741 | SAMN04488007_2791 | PAS domain S-box-containing protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.669 |
SHJ56807.1 | SHK33879.1 | SAMN04488007_0741 | SAMN04488007_2792 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.836 |
SHJ56807.1 | SHK33926.1 | SAMN04488007_0741 | SAMN04488007_2793 | PAS domain S-box-containing protein. | Adenylate cyclase, class 3. | 0.902 |
SHJ56807.1 | SHK67715.1 | SAMN04488007_0741 | SAMN04488007_3615 | PAS domain S-box-containing protein. | PAS/PAC sensor signal transduction histidine kinase. | 0.781 |
SHJ63670.1 | SHJ56807.1 | SAMN04488007_0950 | SAMN04488007_0741 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SHJ63670.1 | SHJ87452.1 | SAMN04488007_0950 | SAMN04488007_1771 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SHJ63670.1 | SHJ88181.1 | SAMN04488007_0950 | SAMN04488007_1799 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SHJ63670.1 | SHJ88205.1 | SAMN04488007_0950 | SAMN04488007_1800 | Signal transduction histidine kinase. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.999 |
SHJ63670.1 | SHK16887.1 | SAMN04488007_0950 | SAMN04488007_2238 | Signal transduction histidine kinase. | Hpt domain-containing protein. | 0.999 |
SHJ63670.1 | SHK33801.1 | SAMN04488007_0950 | SAMN04488007_2790 | Signal transduction histidine kinase. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.780 |
SHJ63670.1 | SHK33842.1 | SAMN04488007_0950 | SAMN04488007_2791 | Signal transduction histidine kinase. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.792 |
SHJ63670.1 | SHK33879.1 | SAMN04488007_0950 | SAMN04488007_2792 | Signal transduction histidine kinase. | Response regulator receiver domain-containing protein. | 0.837 |
SHJ63670.1 | SHK33926.1 | SAMN04488007_0950 | SAMN04488007_2793 | Signal transduction histidine kinase. | Adenylate cyclase, class 3. | 0.962 |
SHJ63670.1 | SHK67715.1 | SAMN04488007_0950 | SAMN04488007_3615 | Signal transduction histidine kinase. | PAS/PAC sensor signal transduction histidine kinase. | 0.960 |
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