Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ64950.1 | SHK39047.1 | SAMN04488007_0989 | SAMN04488007_2932 | Phosphate-selective porin O and P. | Restriction endonuclease. | 0.491 |
SHJ78503.1 | SHK39047.1 | SAMN04488007_1424 | SAMN04488007_2932 | Alpha-2-macroglobulin family N-terminal region. | Restriction endonuclease. | 0.527 |
SHJ86598.1 | SHK38915.1 | SAMN04488007_1739 | SAMN04488007_2928 | Hypothetical protein. | Nucleotide-binding universal stress protein, UspA family. | 0.550 |
SHJ86598.1 | SHK39047.1 | SAMN04488007_1739 | SAMN04488007_2932 | Hypothetical protein. | Restriction endonuclease. | 0.530 |
SHJ86598.1 | SHK39105.1 | SAMN04488007_1739 | SAMN04488007_2934 | Hypothetical protein. | Hypothetical protein. | 0.451 |
SHK27644.1 | SHK39047.1 | SAMN04488007_2600 | SAMN04488007_2932 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Restriction endonuclease. | 0.530 |
SHK27644.1 | ribB | SAMN04488007_2600 | SAMN04488007_3551 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.999 |
SHK38915.1 | SHJ86598.1 | SAMN04488007_2928 | SAMN04488007_1739 | Nucleotide-binding universal stress protein, UspA family. | Hypothetical protein. | 0.550 |
SHK38915.1 | SHK38978.1 | SAMN04488007_2928 | SAMN04488007_2930 | Nucleotide-binding universal stress protein, UspA family. | Nucleotide-binding universal stress protein, UspA family. | 0.646 |
SHK38915.1 | SHK39012.1 | SAMN04488007_2928 | SAMN04488007_2931 | Nucleotide-binding universal stress protein, UspA family. | Mechanosensitive ion channel. | 0.477 |
SHK38915.1 | SHK39047.1 | SAMN04488007_2928 | SAMN04488007_2932 | Nucleotide-binding universal stress protein, UspA family. | Restriction endonuclease. | 0.553 |
SHK38915.1 | SHK39078.1 | SAMN04488007_2928 | SAMN04488007_2933 | Nucleotide-binding universal stress protein, UspA family. | Metallo-beta-lactamase family protein. | 0.495 |
SHK38915.1 | SHK39105.1 | SAMN04488007_2928 | SAMN04488007_2934 | Nucleotide-binding universal stress protein, UspA family. | Hypothetical protein. | 0.481 |
SHK38978.1 | SHK38915.1 | SAMN04488007_2930 | SAMN04488007_2928 | Nucleotide-binding universal stress protein, UspA family. | Nucleotide-binding universal stress protein, UspA family. | 0.646 |
SHK38978.1 | SHK39012.1 | SAMN04488007_2930 | SAMN04488007_2931 | Nucleotide-binding universal stress protein, UspA family. | Mechanosensitive ion channel. | 0.510 |
SHK38978.1 | SHK39047.1 | SAMN04488007_2930 | SAMN04488007_2932 | Nucleotide-binding universal stress protein, UspA family. | Restriction endonuclease. | 0.606 |
SHK38978.1 | SHK39078.1 | SAMN04488007_2930 | SAMN04488007_2933 | Nucleotide-binding universal stress protein, UspA family. | Metallo-beta-lactamase family protein. | 0.533 |
SHK38978.1 | SHK39105.1 | SAMN04488007_2930 | SAMN04488007_2934 | Nucleotide-binding universal stress protein, UspA family. | Hypothetical protein. | 0.661 |
SHK39012.1 | SHK38915.1 | SAMN04488007_2931 | SAMN04488007_2928 | Mechanosensitive ion channel. | Nucleotide-binding universal stress protein, UspA family. | 0.477 |
SHK39012.1 | SHK38978.1 | SAMN04488007_2931 | SAMN04488007_2930 | Mechanosensitive ion channel. | Nucleotide-binding universal stress protein, UspA family. | 0.510 |
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