Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ60690.1 | SHK42236.1 | SAMN04488007_0860 | SAMN04488007_3040 | Hypothetical protein. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.531 |
SHJ60690.1 | SHK55513.1 | SAMN04488007_0860 | SAMN04488007_3198 | Hypothetical protein. | Hypothetical protein. | 0.471 |
SHJ60690.1 | SHK55544.1 | SAMN04488007_0860 | SAMN04488007_3199 | Hypothetical protein. | Protein of unknown function. | 0.427 |
SHJ60690.1 | SHK79747.1 | SAMN04488007_0860 | SAMN04488007_3856 | Hypothetical protein. | Anti-sigma-K factor rskA. | 0.579 |
SHK29566.1 | SHK55513.1 | SAMN04488007_2655 | SAMN04488007_3198 | Hypothetical protein. | Hypothetical protein. | 0.409 |
SHK29566.1 | SHK55544.1 | SAMN04488007_2655 | SAMN04488007_3199 | Hypothetical protein. | Protein of unknown function. | 0.407 |
SHK42236.1 | SHJ60690.1 | SAMN04488007_3040 | SAMN04488007_0860 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Hypothetical protein. | 0.531 |
SHK42236.1 | SHK55513.1 | SAMN04488007_3040 | SAMN04488007_3198 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Hypothetical protein. | 0.546 |
SHK42236.1 | SHK55544.1 | SAMN04488007_3040 | SAMN04488007_3199 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Protein of unknown function. | 0.451 |
SHK42236.1 | SHK79747.1 | SAMN04488007_3040 | SAMN04488007_3856 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Anti-sigma-K factor rskA. | 0.576 |
SHK55480.1 | SHK55513.1 | SAMN04488007_3197 | SAMN04488007_3198 | Hypothetical protein. | Hypothetical protein. | 0.808 |
SHK55480.1 | SHK55544.1 | SAMN04488007_3197 | SAMN04488007_3199 | Hypothetical protein. | Protein of unknown function. | 0.792 |
SHK55480.1 | SHK55566.1 | SAMN04488007_3197 | SAMN04488007_3200 | Hypothetical protein. | Smr domain-containing protein. | 0.629 |
SHK55513.1 | SHJ60690.1 | SAMN04488007_3198 | SAMN04488007_0860 | Hypothetical protein. | Hypothetical protein. | 0.471 |
SHK55513.1 | SHK29566.1 | SAMN04488007_3198 | SAMN04488007_2655 | Hypothetical protein. | Hypothetical protein. | 0.409 |
SHK55513.1 | SHK42236.1 | SAMN04488007_3198 | SAMN04488007_3040 | Hypothetical protein. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.546 |
SHK55513.1 | SHK55480.1 | SAMN04488007_3198 | SAMN04488007_3197 | Hypothetical protein. | Hypothetical protein. | 0.808 |
SHK55513.1 | SHK55544.1 | SAMN04488007_3198 | SAMN04488007_3199 | Hypothetical protein. | Protein of unknown function. | 0.938 |
SHK55513.1 | SHK55566.1 | SAMN04488007_3198 | SAMN04488007_3200 | Hypothetical protein. | Smr domain-containing protein. | 0.564 |
SHK55544.1 | SHJ60690.1 | SAMN04488007_3199 | SAMN04488007_0860 | Protein of unknown function. | Hypothetical protein. | 0.427 |
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