STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK59683.1Polysaccharide export outer membrane protein. (260 aa)    
Predicted Functional Partners:
SHK59716.1
Capsular exopolysaccharide family.
 
 0.999
SHJ70970.1
Capsular exopolysaccharide family.
 
 0.998
SHJ71366.1
G-rich domain on putative tyrosine kinase.
 
 0.998
SHJ72004.1
Capsular exopolysaccharide family.
 
 0.997
SHK59653.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.926
SHK59627.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
       0.683
SHJ44559.1
ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.618
SHJ72050.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
 
 0.605
SHJ70692.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
 
 0.594
SHJ71072.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
 
 0.594
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.