STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK62292.1Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily. (502 aa)    
Predicted Functional Partners:
SHK62261.1
Uncharacterized conserved protein, Alpha-E superfamily.
    0.982
SHK62229.1
Transglutaminase-like enzyme, putative cysteine protease.
 
    0.936
SHJ38347.1
Transglutaminase-like enzyme, putative cysteine protease.
 
    0.804
SHJ63703.1
Transglutaminase-like enzyme, putative cysteine protease.
 
    0.791
SHJ38413.1
Uncharacterized conserved protein, DUF2126 family.
 
    0.763
SHJ38381.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
 
   
0.643
SHK62325.1
Protein of unknown function.
       0.531
SHJ43429.1
Hypothetical protein.
 
     0.514
SHK62355.1
L-threonine aldolase.
       0.506
SHJ67833.1
SSU ribosomal protein S6P modification protein.
    
  0.455
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.