Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ33776.1 | SHK65406.1 | SAMN04488007_0006 | SAMN04488007_3531 | Hypothetical protein. | HmuY protein. | 0.550 |
SHJ86460.1 | SHK65406.1 | SAMN04488007_1733 | SAMN04488007_3531 | Starch-binding associating with outer membrane. | HmuY protein. | 0.558 |
SHJ86460.1 | SHK65427.1 | SAMN04488007_1733 | SAMN04488007_3532 | Starch-binding associating with outer membrane. | Outer membrane receptor for ferrienterochelin and colicins. | 0.474 |
SHK12425.1 | SHK65406.1 | SAMN04488007_2086 | SAMN04488007_3531 | Hypothetical protein. | HmuY protein. | 0.589 |
SHK12425.1 | SHK65427.1 | SAMN04488007_2086 | SAMN04488007_3532 | Hypothetical protein. | Outer membrane receptor for ferrienterochelin and colicins. | 0.470 |
SHK32712.1 | SHK65406.1 | SAMN04488007_2759 | SAMN04488007_3531 | Protein of unknown function. | HmuY protein. | 0.562 |
SHK32712.1 | SHK65427.1 | SAMN04488007_2759 | SAMN04488007_3532 | Protein of unknown function. | Outer membrane receptor for ferrienterochelin and colicins. | 0.435 |
SHK65406.1 | SHJ33776.1 | SAMN04488007_3531 | SAMN04488007_0006 | HmuY protein. | Hypothetical protein. | 0.550 |
SHK65406.1 | SHJ86460.1 | SAMN04488007_3531 | SAMN04488007_1733 | HmuY protein. | Starch-binding associating with outer membrane. | 0.558 |
SHK65406.1 | SHK12425.1 | SAMN04488007_3531 | SAMN04488007_2086 | HmuY protein. | Hypothetical protein. | 0.589 |
SHK65406.1 | SHK32712.1 | SAMN04488007_3531 | SAMN04488007_2759 | HmuY protein. | Protein of unknown function. | 0.562 |
SHK65406.1 | SHK65427.1 | SAMN04488007_3531 | SAMN04488007_3532 | HmuY protein. | Outer membrane receptor for ferrienterochelin and colicins. | 0.927 |
SHK65406.1 | SHK65451.1 | SAMN04488007_3531 | SAMN04488007_3533 | HmuY protein. | Hypothetical protein. | 0.759 |
SHK65406.1 | SHK65479.1 | SAMN04488007_3531 | SAMN04488007_3534 | HmuY protein. | Ankyrin repeat. | 0.700 |
SHK65406.1 | SHK65508.1 | SAMN04488007_3531 | SAMN04488007_3535 | HmuY protein. | Predicted protein. | 0.756 |
SHK65406.1 | SHK65533.1 | SAMN04488007_3531 | SAMN04488007_3536 | HmuY protein. | Sulfite reductase (NADPH) flavoprotein alpha-component. | 0.668 |
SHK65406.1 | SHK74809.1 | SAMN04488007_3531 | SAMN04488007_3757 | HmuY protein. | Aspartate kinase. | 0.706 |
SHK65427.1 | SHJ86460.1 | SAMN04488007_3532 | SAMN04488007_1733 | Outer membrane receptor for ferrienterochelin and colicins. | Starch-binding associating with outer membrane. | 0.474 |
SHK65427.1 | SHK12425.1 | SAMN04488007_3532 | SAMN04488007_2086 | Outer membrane receptor for ferrienterochelin and colicins. | Hypothetical protein. | 0.470 |
SHK65427.1 | SHK32712.1 | SAMN04488007_3532 | SAMN04488007_2759 | Outer membrane receptor for ferrienterochelin and colicins. | Protein of unknown function. | 0.435 |
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