STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK65707.1Endo-1,4-beta-xylanase. (384 aa)    
Predicted Functional Partners:
SHK65655.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.987
SHK65681.1
Sugar (Glycoside-Pentoside-Hexuronide) transporter.
 
     0.892
SHK39783.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.720
SHJ80661.1
Putative esterase.
   
   0.685
SHK84527.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.644
SHK65842.1
Hypothetical protein.
   
   0.632
SHK68996.1
Hypothetical protein.
 
  
  0.612
SHK40018.1
Sialate O-acetylesterase.
 
  
 0.602
SHJ77019.1
Hypothetical protein.
    
   0.581
SHJ86176.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
    
 0.568
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.