Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHJ77657.1 | SHK66420.1 | SAMN04488007_1391 | SAMN04488007_3568 | Hypothetical protein. | Penicillin amidase. | 0.408 |
| SHK18109.1 | SHK66420.1 | SAMN04488007_2283 | SAMN04488007_3568 | CubicO group peptidase, beta-lactamase class C family. | Penicillin amidase. | 0.440 |
| SHK66393.1 | SHK66420.1 | SAMN04488007_3567 | SAMN04488007_3568 | Thiol:disulfide interchange protein DsbD. | Penicillin amidase. | 0.515 |
| SHK66393.1 | SHK66449.1 | SAMN04488007_3567 | SAMN04488007_3569 | Thiol:disulfide interchange protein DsbD. | Magnesium chelatase family protein. | 0.516 |
| SHK66393.1 | tilS | SAMN04488007_3567 | SAMN04488007_3566 | Thiol:disulfide interchange protein DsbD. | tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.798 |
| SHK66420.1 | SHJ77657.1 | SAMN04488007_3568 | SAMN04488007_1391 | Penicillin amidase. | Hypothetical protein. | 0.408 |
| SHK66420.1 | SHK18109.1 | SAMN04488007_3568 | SAMN04488007_2283 | Penicillin amidase. | CubicO group peptidase, beta-lactamase class C family. | 0.440 |
| SHK66420.1 | SHK66393.1 | SAMN04488007_3568 | SAMN04488007_3567 | Penicillin amidase. | Thiol:disulfide interchange protein DsbD. | 0.515 |
| SHK66420.1 | SHK66449.1 | SAMN04488007_3568 | SAMN04488007_3569 | Penicillin amidase. | Magnesium chelatase family protein. | 0.777 |
| SHK66420.1 | SHK66975.1 | SAMN04488007_3568 | SAMN04488007_3589 | Penicillin amidase. | D-citramalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.442 |
| SHK66420.1 | tilS | SAMN04488007_3568 | SAMN04488007_3566 | Penicillin amidase. | tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.534 |
| SHK66449.1 | SHK66393.1 | SAMN04488007_3569 | SAMN04488007_3567 | Magnesium chelatase family protein. | Thiol:disulfide interchange protein DsbD. | 0.516 |
| SHK66449.1 | SHK66420.1 | SAMN04488007_3569 | SAMN04488007_3568 | Magnesium chelatase family protein. | Penicillin amidase. | 0.777 |
| SHK66449.1 | tilS | SAMN04488007_3569 | SAMN04488007_3566 | Magnesium chelatase family protein. | tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.520 |
| SHK66975.1 | SHK66420.1 | SAMN04488007_3589 | SAMN04488007_3568 | D-citramalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | Penicillin amidase. | 0.442 |
| tilS | SHK66393.1 | SAMN04488007_3566 | SAMN04488007_3567 | tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | Thiol:disulfide interchange protein DsbD. | 0.798 |
| tilS | SHK66420.1 | SAMN04488007_3566 | SAMN04488007_3568 | tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | Penicillin amidase. | 0.534 |
| tilS | SHK66449.1 | SAMN04488007_3566 | SAMN04488007_3569 | tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | Magnesium chelatase family protein. | 0.520 |