Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ47661.1 | SHJ59774.1 | SAMN04488007_0458 | SAMN04488007_0830 | Gliding motility-associated lipoprotein GldD. | Protein involved in gliding motility SprE; Manually curated. | 0.657 |
SHJ47661.1 | SHJ84063.1 | SAMN04488007_0458 | SAMN04488007_1638 | Gliding motility-associated lipoprotein GldD. | ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family. | 0.643 |
SHJ47661.1 | SHK67180.1 | SAMN04488007_0458 | SAMN04488007_3597 | Gliding motility-associated lipoprotein GldD. | Hypothetical protein. | 0.665 |
SHJ47661.1 | SHK76129.1 | SAMN04488007_0458 | SAMN04488007_3799 | Gliding motility-associated lipoprotein GldD. | Protein involved in gliding motility GldJ. | 0.878 |
SHJ58091.1 | SHJ59774.1 | SAMN04488007_0780 | SAMN04488007_0830 | Type IX secretion system membrane protein, PorP/SprF family. | Protein involved in gliding motility SprE; Manually curated. | 0.653 |
SHJ58091.1 | SHK67180.1 | SAMN04488007_0780 | SAMN04488007_3597 | Type IX secretion system membrane protein, PorP/SprF family. | Hypothetical protein. | 0.601 |
SHJ58091.1 | SHK76129.1 | SAMN04488007_0780 | SAMN04488007_3799 | Type IX secretion system membrane protein, PorP/SprF family. | Protein involved in gliding motility GldJ. | 0.475 |
SHJ59774.1 | SHJ47661.1 | SAMN04488007_0830 | SAMN04488007_0458 | Protein involved in gliding motility SprE; Manually curated. | Gliding motility-associated lipoprotein GldD. | 0.657 |
SHJ59774.1 | SHJ58091.1 | SAMN04488007_0830 | SAMN04488007_0780 | Protein involved in gliding motility SprE; Manually curated. | Type IX secretion system membrane protein, PorP/SprF family. | 0.653 |
SHJ59774.1 | SHJ82883.1 | SAMN04488007_0830 | SAMN04488007_1588 | Protein involved in gliding motility SprE; Manually curated. | Hypothetical protein. | 0.754 |
SHJ59774.1 | SHK42493.1 | SAMN04488007_0830 | SAMN04488007_3049 | Protein involved in gliding motility SprE; Manually curated. | Hypothetical protein. | 0.435 |
SHJ59774.1 | SHK67180.1 | SAMN04488007_0830 | SAMN04488007_3597 | Protein involved in gliding motility SprE; Manually curated. | Hypothetical protein. | 0.631 |
SHJ59774.1 | SHK67209.1 | SAMN04488007_0830 | SAMN04488007_3598 | Protein involved in gliding motility SprE; Manually curated. | Hypothetical protein. | 0.592 |
SHJ59774.1 | SHK74318.1 | SAMN04488007_0830 | SAMN04488007_3741 | Protein involved in gliding motility SprE; Manually curated. | Lipid A 3-O-deacylase (PagL). | 0.456 |
SHJ59774.1 | SHK76129.1 | SAMN04488007_0830 | SAMN04488007_3799 | Protein involved in gliding motility SprE; Manually curated. | Protein involved in gliding motility GldJ. | 0.770 |
SHJ59774.1 | SHK76526.1 | SAMN04488007_0830 | SAMN04488007_3812 | Protein involved in gliding motility SprE; Manually curated. | Outer membrane transport energization protein TonB. | 0.609 |
SHJ82883.1 | SHJ59774.1 | SAMN04488007_1588 | SAMN04488007_0830 | Hypothetical protein. | Protein involved in gliding motility SprE; Manually curated. | 0.754 |
SHJ82883.1 | SHK42493.1 | SAMN04488007_1588 | SAMN04488007_3049 | Hypothetical protein. | Hypothetical protein. | 0.475 |
SHJ82883.1 | SHK67180.1 | SAMN04488007_1588 | SAMN04488007_3597 | Hypothetical protein. | Hypothetical protein. | 0.619 |
SHJ82883.1 | SHK67209.1 | SAMN04488007_1588 | SAMN04488007_3598 | Hypothetical protein. | Hypothetical protein. | 0.427 |
page 1 of 3