Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ82907.1 | SHK18292.1 | SAMN04488007_1589 | SAMN04488007_2289 | OmpA family protein. | Chemotaxis protein MotB. | 0.565 |
SHJ82907.1 | SHK67389.1 | SAMN04488007_1589 | SAMN04488007_3604 | OmpA family protein. | Chemotaxis protein MotB. | 0.623 |
SHJ88205.1 | SHK16887.1 | SAMN04488007_1800 | SAMN04488007_2238 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Hpt domain-containing protein. | 0.999 |
SHJ88205.1 | SHK18292.1 | SAMN04488007_1800 | SAMN04488007_2289 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Chemotaxis protein MotB. | 0.925 |
SHJ88205.1 | SHK67389.1 | SAMN04488007_1800 | SAMN04488007_3604 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Chemotaxis protein MotB. | 0.925 |
SHJ88617.1 | SHK18292.1 | SAMN04488007_1818 | SAMN04488007_2289 | phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. | Chemotaxis protein MotB. | 0.545 |
SHJ88617.1 | SHK67389.1 | SAMN04488007_1818 | SAMN04488007_3604 | phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. | Chemotaxis protein MotB. | 0.545 |
SHK16887.1 | SHJ88205.1 | SAMN04488007_2238 | SAMN04488007_1800 | Hpt domain-containing protein. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.999 |
SHK16887.1 | SHK18292.1 | SAMN04488007_2238 | SAMN04488007_2289 | Hpt domain-containing protein. | Chemotaxis protein MotB. | 0.547 |
SHK16887.1 | SHK67389.1 | SAMN04488007_2238 | SAMN04488007_3604 | Hpt domain-containing protein. | Chemotaxis protein MotB. | 0.547 |
SHK18292.1 | SHJ82907.1 | SAMN04488007_2289 | SAMN04488007_1589 | Chemotaxis protein MotB. | OmpA family protein. | 0.565 |
SHK18292.1 | SHJ88205.1 | SAMN04488007_2289 | SAMN04488007_1800 | Chemotaxis protein MotB. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.925 |
SHK18292.1 | SHJ88617.1 | SAMN04488007_2289 | SAMN04488007_1818 | Chemotaxis protein MotB. | phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. | 0.545 |
SHK18292.1 | SHK16887.1 | SAMN04488007_2289 | SAMN04488007_2238 | Chemotaxis protein MotB. | Hpt domain-containing protein. | 0.547 |
SHK18292.1 | SHK23955.1 | SAMN04488007_2289 | SAMN04488007_2490 | Chemotaxis protein MotB. | Outer membrane protein OmpA. | 0.520 |
SHK18292.1 | SHK58587.1 | SAMN04488007_2289 | SAMN04488007_3299 | Chemotaxis protein MotB. | phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. | 0.545 |
SHK18292.1 | SHK67389.1 | SAMN04488007_2289 | SAMN04488007_3604 | Chemotaxis protein MotB. | Chemotaxis protein MotB. | 0.660 |
SHK18292.1 | SHK76555.1 | SAMN04488007_2289 | SAMN04488007_3813 | Chemotaxis protein MotB. | Outer membrane transport energization protein ExbD. | 0.401 |
SHK23955.1 | SHK18292.1 | SAMN04488007_2490 | SAMN04488007_2289 | Outer membrane protein OmpA. | Chemotaxis protein MotB. | 0.520 |
SHK23955.1 | SHK67389.1 | SAMN04488007_2490 | SAMN04488007_3604 | Outer membrane protein OmpA. | Chemotaxis protein MotB. | 0.586 |
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