Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ67081.1 | SHJ71963.1 | SAMN04488007_1055 | SAMN04488007_1205 | C-terminal domain of CHU protein family protein. | Na+-driven multidrug efflux pump. | 0.760 |
SHJ67081.1 | SHK21161.1 | SAMN04488007_1055 | SAMN04488007_2383 | C-terminal domain of CHU protein family protein. | Patatin-like phospholipase. | 0.701 |
SHJ67081.1 | SHK22707.1 | SAMN04488007_1055 | SAMN04488007_2444 | C-terminal domain of CHU protein family protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.640 |
SHJ67081.1 | SHK73456.1 | SAMN04488007_1055 | SAMN04488007_3712 | C-terminal domain of CHU protein family protein. | CAAX protease self-immunity. | 0.500 |
SHJ67081.1 | SHK86372.1 | SAMN04488007_1055 | SAMN04488007_4022 | C-terminal domain of CHU protein family protein. | Hypothetical protein; Partial gene; manually curated. | 0.769 |
SHJ71963.1 | SHJ67081.1 | SAMN04488007_1205 | SAMN04488007_1055 | Na+-driven multidrug efflux pump. | C-terminal domain of CHU protein family protein. | 0.760 |
SHJ71963.1 | SHK21161.1 | SAMN04488007_1205 | SAMN04488007_2383 | Na+-driven multidrug efflux pump. | Patatin-like phospholipase. | 0.769 |
SHJ71963.1 | SHK22707.1 | SAMN04488007_1205 | SAMN04488007_2444 | Na+-driven multidrug efflux pump. | Glycosyltransferase involved in cell wall bisynthesis. | 0.772 |
SHJ71963.1 | SHK73456.1 | SAMN04488007_1205 | SAMN04488007_3712 | Na+-driven multidrug efflux pump. | CAAX protease self-immunity. | 0.617 |
SHJ71963.1 | SHK86004.1 | SAMN04488007_1205 | SAMN04488007_4014 | Na+-driven multidrug efflux pump. | Gliding motility-associated C-terminal domain-containing protein. | 0.774 |
SHJ71963.1 | SHK86372.1 | SAMN04488007_1205 | SAMN04488007_4022 | Na+-driven multidrug efflux pump. | Hypothetical protein; Partial gene; manually curated. | 0.773 |
SHK21161.1 | SHJ67081.1 | SAMN04488007_2383 | SAMN04488007_1055 | Patatin-like phospholipase. | C-terminal domain of CHU protein family protein. | 0.701 |
SHK21161.1 | SHJ71963.1 | SAMN04488007_2383 | SAMN04488007_1205 | Patatin-like phospholipase. | Na+-driven multidrug efflux pump. | 0.769 |
SHK21161.1 | SHK22707.1 | SAMN04488007_2383 | SAMN04488007_2444 | Patatin-like phospholipase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.689 |
SHK21161.1 | SHK73456.1 | SAMN04488007_2383 | SAMN04488007_3712 | Patatin-like phospholipase. | CAAX protease self-immunity. | 0.508 |
SHK21161.1 | SHK86004.1 | SAMN04488007_2383 | SAMN04488007_4014 | Patatin-like phospholipase. | Gliding motility-associated C-terminal domain-containing protein. | 0.769 |
SHK21161.1 | SHK86372.1 | SAMN04488007_2383 | SAMN04488007_4022 | Patatin-like phospholipase. | Hypothetical protein; Partial gene; manually curated. | 0.762 |
SHK22707.1 | SHJ67081.1 | SAMN04488007_2444 | SAMN04488007_1055 | Glycosyltransferase involved in cell wall bisynthesis. | C-terminal domain of CHU protein family protein. | 0.640 |
SHK22707.1 | SHJ71963.1 | SAMN04488007_2444 | SAMN04488007_1205 | Glycosyltransferase involved in cell wall bisynthesis. | Na+-driven multidrug efflux pump. | 0.772 |
SHK22707.1 | SHK21161.1 | SAMN04488007_2444 | SAMN04488007_2383 | Glycosyltransferase involved in cell wall bisynthesis. | Patatin-like phospholipase. | 0.689 |
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