Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ36971.1 | SHK80476.1 | SAMN04488007_0115 | SAMN04488007_3877 | Hypothetical protein. | Hypothetical protein. | 0.581 |
SHJ36971.1 | SHK80540.1 | SAMN04488007_0115 | SAMN04488007_3879 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.495 |
SHJ36971.1 | SHK80574.1 | SAMN04488007_0115 | SAMN04488007_3880 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.495 |
SHK30927.1 | SHK80476.1 | SAMN04488007_2700 | SAMN04488007_3877 | Uncharacterized protein. | Hypothetical protein. | 0.456 |
SHK62020.1 | SHK80476.1 | SAMN04488007_3414 | SAMN04488007_3877 | Acetyltransferase (GNAT) domain-containing protein. | Hypothetical protein. | 0.407 |
SHK80476.1 | SHJ36971.1 | SAMN04488007_3877 | SAMN04488007_0115 | Hypothetical protein. | Hypothetical protein. | 0.581 |
SHK80476.1 | SHK30927.1 | SAMN04488007_3877 | SAMN04488007_2700 | Hypothetical protein. | Uncharacterized protein. | 0.456 |
SHK80476.1 | SHK62020.1 | SAMN04488007_3877 | SAMN04488007_3414 | Hypothetical protein. | Acetyltransferase (GNAT) domain-containing protein. | 0.407 |
SHK80476.1 | SHK80510.1 | SAMN04488007_3877 | SAMN04488007_3878 | Hypothetical protein. | Response regulator receiver domain-containing protein. | 0.586 |
SHK80476.1 | SHK80540.1 | SAMN04488007_3877 | SAMN04488007_3879 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.584 |
SHK80476.1 | SHK80574.1 | SAMN04488007_3877 | SAMN04488007_3880 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.524 |
SHK80476.1 | coaD | SAMN04488007_3877 | SAMN04488007_3881 | Hypothetical protein. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.427 |
SHK80510.1 | SHK80476.1 | SAMN04488007_3878 | SAMN04488007_3877 | Response regulator receiver domain-containing protein. | Hypothetical protein. | 0.586 |
SHK80510.1 | SHK80540.1 | SAMN04488007_3878 | SAMN04488007_3879 | Response regulator receiver domain-containing protein. | PAS domain S-box-containing protein. | 0.963 |
SHK80510.1 | SHK80574.1 | SAMN04488007_3878 | SAMN04488007_3880 | Response regulator receiver domain-containing protein. | PAS domain S-box-containing protein. | 0.946 |
SHK80510.1 | coaD | SAMN04488007_3878 | SAMN04488007_3881 | Response regulator receiver domain-containing protein. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.455 |
SHK80540.1 | SHJ36971.1 | SAMN04488007_3879 | SAMN04488007_0115 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.495 |
SHK80540.1 | SHK80476.1 | SAMN04488007_3879 | SAMN04488007_3877 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.584 |
SHK80540.1 | SHK80510.1 | SAMN04488007_3879 | SAMN04488007_3878 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.963 |
SHK80540.1 | SHK80574.1 | SAMN04488007_3879 | SAMN04488007_3880 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.889 |
page 1 of 2