STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ27967.1Isoquinoline 1-oxidoreductase, beta subunit. (726 aa)    
Predicted Functional Partners:
SIQ27935.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 0.997
SIR33007.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 0.990
SIQ67006.1
Xanthine and CO dehydrogenase maturation factor, XdhC/CoxF family.
 
 
 0.893
SIQ27900.1
Hypothetical protein.
 
    0.888
SIQ66972.1
Molybdenum cofactor cytidylyltransferase.
 
  
 0.828
SIQ23368.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
  
 
 0.685
SIR33717.1
tRNA(Arg) A34 adenosine deaminase TadA.
    
  0.532
SIQ27867.1
Hypothetical protein.
       0.509
tadA
tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
    
  0.435
SIR35901.1
Hypothetical protein.
  
 
 0.406
Your Current Organism:
Maribacter ulvicola
NCBI taxonomy Id: 228959
Other names: Bacteroidetes bacterium KMM 3951, DSM 15366, KCTC 12969, KMM 3951, M. ulvicola, Maribacter ulvicola Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.