STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ30751.1Hypothetical protein. (230 aa)    
Predicted Functional Partners:
SIQ30804.1
Uncharacterized protein YwqG.
 
     0.907
SIQ30678.1
Hypothetical protein.
 
     0.820
SIQ30416.1
Cell wall assembly regulator SMI1.
 
     0.799
SIQ30494.1
Hypothetical protein.
 
     0.798
SIQ30463.1
Adenylosuccinate synthase.
 
     0.789
SIQ30282.1
Signal transduction histidine kinase.
 
     0.779
SIQ29960.1
Hypothetical protein.
  
     0.774
SIQ30105.1
Hypothetical protein.
  
     0.774
SIQ29993.1
Protein of unknown function.
  
     0.768
SIQ30038.1
Hypothetical protein.
  
     0.762
Your Current Organism:
Maribacter ulvicola
NCBI taxonomy Id: 228959
Other names: Bacteroidetes bacterium KMM 3951, DSM 15366, KCTC 12969, KMM 3951, M. ulvicola, Maribacter ulvicola Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.