STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ41786.1Haem-NO-binding. (180 aa)    
Predicted Functional Partners:
SIQ41812.1
PAS domain S-box-containing protein.
 
   
 0.961
SIQ41913.1
Hypothetical protein.
 
     0.947
SIQ41851.1
Uncharacterized conserved protein, contains FIST_N domain.
 
   
 0.926
SIQ40783.1
Radical SAM superfamily enzyme YgiQ, UPF0313 family.
 
 
 0.913
SIQ41881.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.912
SIQ41949.1
Two component transcriptional regulator, LytTR family.
 
     0.822
SIQ41752.1
Response regulator receiver domain-containing protein.
 
     0.766
SIQ42051.1
Tfp pilus assembly protein PilF.
  
     0.695
SIQ42204.1
Glycosyl transferase family 2.
  
  
  0.678
SIQ42238.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.667
Your Current Organism:
Maribacter ulvicola
NCBI taxonomy Id: 228959
Other names: Bacteroidetes bacterium KMM 3951, DSM 15366, KCTC 12969, KMM 3951, M. ulvicola, Maribacter ulvicola Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.