STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ42304.1Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family. (513 aa)    
Predicted Functional Partners:
SIQ42341.1
Hypothetical protein.
 
     0.957
SIQ42377.1
Hypothetical protein.
 
     0.956
SIQ42204.1
Glycosyl transferase family 2.
 
     0.788
SIQ42051.1
Tfp pilus assembly protein PilF.
  
     0.774
SIQ42095.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.774
SIQ42238.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.774
SIQ42270.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.774
SIQ41913.1
Hypothetical protein.
  
     0.754
SIQ54861.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.750
SIQ41786.1
Haem-NO-binding.
  
     0.660
Your Current Organism:
Maribacter ulvicola
NCBI taxonomy Id: 228959
Other names: Bacteroidetes bacterium KMM 3951, DSM 15366, KCTC 12969, KMM 3951, M. ulvicola, Maribacter ulvicola Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.