STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ57042.1Type IV pili methyl-accepting chemotaxis transducer N-term. (272 aa)    
Predicted Functional Partners:
SIQ02959.1
PAS domain S-box-containing protein.
  
 0.760
SIQ34577.1
Hypothetical protein.
 
     0.739
SIQ34605.1
Hypothetical protein.
  
     0.731
SIQ94036.1
Regulatory protein, luxR family.
  
  0.689
SIQ41812.1
PAS domain S-box-containing protein.
 
 
 0.680
SIQ91844.1
Signal transduction histidine kinase.
  
 0.633
SIQ90910.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.629
SIR38174.1
Hypothetical protein.
  
     0.620
SIQ60163.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.599
SIQ35845.1
Signal transduction histidine kinase.
  
 0.571
Your Current Organism:
Maribacter ulvicola
NCBI taxonomy Id: 228959
Other names: Bacteroidetes bacterium KMM 3951, DSM 15366, KCTC 12969, KMM 3951, M. ulvicola, Maribacter ulvicola Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.