STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ86843.1Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. (494 aa)    
Predicted Functional Partners:
SIQ86882.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.952
SIQ86915.1
Hypothetical protein.
       0.800
SIP92072.1
Protein of unknown function.
 
  
  0.785
SIQ87062.1
Pyridine nucleotide-disulphide oxidoreductase.
 
    0.747
SIQ87025.1
4Fe-4S binding domain-containing protein.
 
    0.729
SIQ54551.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
  
 
 0.656
SIQ12319.1
Tetratricopeptide repeat-containing protein.
  
  0.645
SIP99079.1
TPR repeat-containing protein.
  
  0.624
SIQ05128.1
Protein involved in gliding motility SprE.
  
  0.624
SIQ05594.1
Hypothetical protein.
  
  0.624
Your Current Organism:
Maribacter ulvicola
NCBI taxonomy Id: 228959
Other names: Bacteroidetes bacterium KMM 3951, DSM 15366, KCTC 12969, KMM 3951, M. ulvicola, Maribacter ulvicola Nedashkovskaya et al. 2004
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