STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ89231.1Protein involved in gliding motility GldN. (295 aa)    
Predicted Functional Partners:
SIQ89198.1
Protein involved in gliding motility GldM.
 
   
 0.956
SIQ89169.1
Protein involved in gliding motility GldL.
 
   
 0.915
SIR10766.1
Protein involved in gliding motility GldJ.
 
   
 0.864
SIQ89130.1
Protein involved in gliding motility GldK.
 
   
 0.862
SIQ23831.1
Protein involved in gliding motility SprA.
  
   
 0.825
SIP96145.1
Protein involved in gliding motility GldD.
  
   
 0.825
SIQ05128.1
Protein involved in gliding motility SprE.
  
   
 0.811
SIR39272.1
Probable protein-translocating porin PorT.
  
   
 0.792
SIQ57599.1
Protein of unknown function.
  
     0.772
SIR08527.1
Protein involved in gliding motility GldB.
  
   
 0.767
Your Current Organism:
Maribacter ulvicola
NCBI taxonomy Id: 228959
Other names: Bacteroidetes bacterium KMM 3951, DSM 15366, KCTC 12969, KMM 3951, M. ulvicola, Maribacter ulvicola Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.