STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR00412.1Por secretion system C-terminal sorting domain-containing protein. (2007 aa)    
Predicted Functional Partners:
SIQ78399.1
Conserved hypothetical protein, HNE_0200 family.
  
  
  0.816
SIQ89543.1
Hypothetical protein.
  
 
   0.768
SIR21848.1
Hypothetical protein.
  
     0.766
SIQ02959.1
PAS domain S-box-containing protein.
  
     0.763
SIQ24830.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.762
SIQ77976.1
Hypothetical protein.
  
    0.755
SIQ78445.1
Uncharacterized NAD(P)/FAD-binding protein YdhS.
  
     0.744
SIQ68099.1
Glycerophosphoryl diester phosphodiesterase.
  
     0.736
SIQ34009.1
Hypothetical protein.
  
     0.712
SIR32769.1
WD40-like Beta Propeller Repeat.
  
 
   0.703
Your Current Organism:
Maribacter ulvicola
NCBI taxonomy Id: 228959
Other names: Bacteroidetes bacterium KMM 3951, DSM 15366, KCTC 12969, KMM 3951, M. ulvicola, Maribacter ulvicola Nedashkovskaya et al. 2004
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