Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIP95128.1 | SIQ23919.1 | SAMN05421797_101122 | SAMN05421797_1011141 | Hypothetical protein. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.499 |
SIP95128.1 | SIR09857.1 | SAMN05421797_101122 | SAMN05421797_10690 | Hypothetical protein. | CarboxypepD_reg-like domain-containing protein. | 0.511 |
SIP95128.1 | SIR11585.1 | SAMN05421797_101122 | SAMN05421797_106157 | Hypothetical protein. | Outer membrane transport energization protein TonB. | 0.501 |
SIQ18945.1 | SIQ31832.1 | SAMN05421797_101987 | SAMN05421797_1011386 | Protein of unknown function. | Protein of unknown function (DU1801). | 0.528 |
SIQ18945.1 | SIR09857.1 | SAMN05421797_101987 | SAMN05421797_10690 | Protein of unknown function. | CarboxypepD_reg-like domain-containing protein. | 0.473 |
SIQ18945.1 | SIR09886.1 | SAMN05421797_101987 | SAMN05421797_10691 | Protein of unknown function. | GLPGLI family protein. | 0.406 |
SIQ23919.1 | SIP95128.1 | SAMN05421797_1011141 | SAMN05421797_101122 | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Hypothetical protein. | 0.499 |
SIQ23919.1 | SIR09857.1 | SAMN05421797_1011141 | SAMN05421797_10690 | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | CarboxypepD_reg-like domain-containing protein. | 0.518 |
SIQ23919.1 | SIR11585.1 | SAMN05421797_1011141 | SAMN05421797_106157 | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Outer membrane transport energization protein TonB. | 0.656 |
SIQ31832.1 | SIQ18945.1 | SAMN05421797_1011386 | SAMN05421797_101987 | Protein of unknown function (DU1801). | Protein of unknown function. | 0.528 |
SIQ31832.1 | SIR09857.1 | SAMN05421797_1011386 | SAMN05421797_10690 | Protein of unknown function (DU1801). | CarboxypepD_reg-like domain-containing protein. | 0.471 |
SIQ38892.1 | SIR09857.1 | SAMN05421797_1011614 | SAMN05421797_10690 | Conserved repeat domain-containing protein. | CarboxypepD_reg-like domain-containing protein. | 0.566 |
SIQ38892.1 | SIR09886.1 | SAMN05421797_1011614 | SAMN05421797_10691 | Conserved repeat domain-containing protein. | GLPGLI family protein. | 0.401 |
SIQ63760.1 | SIR09857.1 | SAMN05421797_102306 | SAMN05421797_10690 | Hypothetical protein. | CarboxypepD_reg-like domain-containing protein. | 0.459 |
SIQ81139.1 | SIR09857.1 | SAMN05421797_103246 | SAMN05421797_10690 | Hypothetical protein. | CarboxypepD_reg-like domain-containing protein. | 0.550 |
SIQ81139.1 | SIR09886.1 | SAMN05421797_103246 | SAMN05421797_10691 | Hypothetical protein. | GLPGLI family protein. | 0.501 |
SIR09857.1 | SIP95128.1 | SAMN05421797_10690 | SAMN05421797_101122 | CarboxypepD_reg-like domain-containing protein. | Hypothetical protein. | 0.511 |
SIR09857.1 | SIQ18945.1 | SAMN05421797_10690 | SAMN05421797_101987 | CarboxypepD_reg-like domain-containing protein. | Protein of unknown function. | 0.473 |
SIR09857.1 | SIQ23919.1 | SAMN05421797_10690 | SAMN05421797_1011141 | CarboxypepD_reg-like domain-containing protein. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.518 |
SIR09857.1 | SIQ31832.1 | SAMN05421797_10690 | SAMN05421797_1011386 | CarboxypepD_reg-like domain-containing protein. | Protein of unknown function (DU1801). | 0.471 |
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