STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR21517.1Nucleotide-binding universal stress protein, UspA family. (282 aa)    
Predicted Functional Partners:
SIR21540.1
Nucleotide-binding universal stress protein, UspA family.
 
    
0.815
SIR21495.1
Nucleotide-binding universal stress protein, UspA family.
 
    
0.661
SIR21466.1
Hypothetical protein.
 
     0.619
SIR21564.1
Thioredoxin 1.
  
   0.580
SIR21417.1
ATP cone domain-containing protein.
 
     0.520
SIR21395.1
Metallo-beta-lactamase family protein.
 
    0.513
SIR21442.1
Mechanosensitive ion channel.
 
     0.483
SIR21375.1
Hypothetical protein.
 
     0.427
Your Current Organism:
Maribacter ulvicola
NCBI taxonomy Id: 228959
Other names: Bacteroidetes bacterium KMM 3951, DSM 15366, KCTC 12969, KMM 3951, M. ulvicola, Maribacter ulvicola Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.