Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIP96145.1 | SIQ05128.1 | SAMN05421797_101159 | SAMN05421797_101499 | Protein involved in gliding motility GldD. | Protein involved in gliding motility SprE. | 0.682 |
SIP96145.1 | SIQ25545.1 | SAMN05421797_101159 | SAMN05421797_1011193 | Protein involved in gliding motility GldD. | Hypothetical protein. | 0.511 |
SIP96145.1 | SIR10766.1 | SAMN05421797_101159 | SAMN05421797_106125 | Protein involved in gliding motility GldD. | Protein involved in gliding motility GldJ. | 0.878 |
SIP96145.1 | SIR37203.1 | SAMN05421797_101159 | SAMN05421797_11183 | Protein involved in gliding motility GldD. | Type IX secretion system membrane protein, PorP/SprF family. | 0.639 |
SIQ04012.1 | SIQ05128.1 | SAMN05421797_101459 | SAMN05421797_101499 | WD40-like Beta Propeller Repeat. | Protein involved in gliding motility SprE. | 0.475 |
SIQ04012.1 | SIQ24896.1 | SAMN05421797_101459 | SAMN05421797_1011171 | WD40-like Beta Propeller Repeat. | Outer membrane protein OmpA. | 0.582 |
SIQ04012.1 | SIQ25545.1 | SAMN05421797_101459 | SAMN05421797_1011193 | WD40-like Beta Propeller Repeat. | Hypothetical protein. | 0.680 |
SIQ04012.1 | SIR32769.1 | SAMN05421797_101459 | SAMN05421797_11059 | WD40-like Beta Propeller Repeat. | WD40-like Beta Propeller Repeat. | 0.594 |
SIQ04012.1 | SIR37176.1 | SAMN05421797_101459 | SAMN05421797_11182 | WD40-like Beta Propeller Repeat. | Gliding motility-associated C-terminal domain-containing protein. | 0.481 |
SIQ04012.1 | SIR37203.1 | SAMN05421797_101459 | SAMN05421797_11183 | WD40-like Beta Propeller Repeat. | Type IX secretion system membrane protein, PorP/SprF family. | 0.757 |
SIQ04012.1 | SIR37222.1 | SAMN05421797_101459 | SAMN05421797_11184 | WD40-like Beta Propeller Repeat. | WD40-like Beta Propeller Repeat. | 0.509 |
SIQ04012.1 | SIR40778.1 | SAMN05421797_101459 | SAMN05421797_11322 | WD40-like Beta Propeller Repeat. | Outer membrane protein OmpA. | 0.503 |
SIQ05128.1 | SIP96145.1 | SAMN05421797_101499 | SAMN05421797_101159 | Protein involved in gliding motility SprE. | Protein involved in gliding motility GldD. | 0.682 |
SIQ05128.1 | SIQ04012.1 | SAMN05421797_101499 | SAMN05421797_101459 | Protein involved in gliding motility SprE. | WD40-like Beta Propeller Repeat. | 0.475 |
SIQ05128.1 | SIQ24896.1 | SAMN05421797_101499 | SAMN05421797_1011171 | Protein involved in gliding motility SprE. | Outer membrane protein OmpA. | 0.585 |
SIQ05128.1 | SIQ25545.1 | SAMN05421797_101499 | SAMN05421797_1011193 | Protein involved in gliding motility SprE. | Hypothetical protein. | 0.764 |
SIQ05128.1 | SIR10766.1 | SAMN05421797_101499 | SAMN05421797_106125 | Protein involved in gliding motility SprE. | Protein involved in gliding motility GldJ. | 0.776 |
SIQ05128.1 | SIR32769.1 | SAMN05421797_101499 | SAMN05421797_11059 | Protein involved in gliding motility SprE. | WD40-like Beta Propeller Repeat. | 0.411 |
SIQ05128.1 | SIR37203.1 | SAMN05421797_101499 | SAMN05421797_11183 | Protein involved in gliding motility SprE. | Type IX secretion system membrane protein, PorP/SprF family. | 0.646 |
SIQ05128.1 | SIR37222.1 | SAMN05421797_101499 | SAMN05421797_11184 | Protein involved in gliding motility SprE. | WD40-like Beta Propeller Repeat. | 0.618 |
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