Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF94425.1 | SHG11691.1 | SAMN05444372_101271 | SAMN05444372_102315 | Hypothetical protein. | Hypothetical protein. | 0.511 |
SHG11447.1 | SHG11480.1 | SAMN05444372_102307 | SAMN05444372_102308 | Glycosyltransferase involved in cell wall bisynthesis. | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.811 |
SHG11447.1 | SHG11509.1 | SAMN05444372_102307 | SAMN05444372_102309 | Glycosyltransferase involved in cell wall bisynthesis. | Glycosyltransferase involved in cell wall bisynthesis. | 0.860 |
SHG11447.1 | SHG11541.1 | SAMN05444372_102307 | SAMN05444372_102310 | Glycosyltransferase involved in cell wall bisynthesis. | Glycosyltransferase involved in cell wall bisynthesis. | 0.773 |
SHG11447.1 | SHG11571.1 | SAMN05444372_102307 | SAMN05444372_102311 | Glycosyltransferase involved in cell wall bisynthesis. | Hypothetical protein. | 0.805 |
SHG11447.1 | SHG11603.1 | SAMN05444372_102307 | SAMN05444372_102312 | Glycosyltransferase involved in cell wall bisynthesis. | Glycosyltransferase involved in cell wall bisynthesis. | 0.811 |
SHG11447.1 | SHG11631.1 | SAMN05444372_102307 | SAMN05444372_102313 | Glycosyltransferase involved in cell wall bisynthesis. | Glycosyltransferase, GT2 family. | 0.773 |
SHG11447.1 | SHG11663.1 | SAMN05444372_102307 | SAMN05444372_102314 | Glycosyltransferase involved in cell wall bisynthesis. | Glycosyltransferase involved in cell wall bisynthesis. | 0.682 |
SHG11447.1 | SHG11691.1 | SAMN05444372_102307 | SAMN05444372_102315 | Glycosyltransferase involved in cell wall bisynthesis. | Hypothetical protein. | 0.620 |
SHG11480.1 | SHG11447.1 | SAMN05444372_102308 | SAMN05444372_102307 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.811 |
SHG11480.1 | SHG11509.1 | SAMN05444372_102308 | SAMN05444372_102309 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.792 |
SHG11480.1 | SHG11541.1 | SAMN05444372_102308 | SAMN05444372_102310 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.792 |
SHG11480.1 | SHG11571.1 | SAMN05444372_102308 | SAMN05444372_102311 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Hypothetical protein. | 0.812 |
SHG11480.1 | SHG11603.1 | SAMN05444372_102308 | SAMN05444372_102312 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.801 |
SHG11480.1 | SHG11631.1 | SAMN05444372_102308 | SAMN05444372_102313 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Glycosyltransferase, GT2 family. | 0.773 |
SHG11480.1 | SHG11663.1 | SAMN05444372_102308 | SAMN05444372_102314 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.709 |
SHG11480.1 | SHG11691.1 | SAMN05444372_102308 | SAMN05444372_102315 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Hypothetical protein. | 0.620 |
SHG11509.1 | SHG11447.1 | SAMN05444372_102309 | SAMN05444372_102307 | Glycosyltransferase involved in cell wall bisynthesis. | Glycosyltransferase involved in cell wall bisynthesis. | 0.860 |
SHG11509.1 | SHG11480.1 | SAMN05444372_102309 | SAMN05444372_102308 | Glycosyltransferase involved in cell wall bisynthesis. | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.792 |
SHG11509.1 | SHG11541.1 | SAMN05444372_102309 | SAMN05444372_102310 | Glycosyltransferase involved in cell wall bisynthesis. | Glycosyltransferase involved in cell wall bisynthesis. | 0.832 |
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