Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF89268.1 | SHG21607.1 | SAMN05444372_10170 | SAMN05444372_103217 | Pimeloyl-ACP methyl ester carboxylesterase. | O-succinylbenzoate synthase. | 0.534 |
SHF89268.1 | SHG29749.1 | SAMN05444372_10170 | SAMN05444372_104170 | Pimeloyl-ACP methyl ester carboxylesterase. | O-succinylbenzoic acid--CoA ligase. | 0.562 |
SHF89268.1 | SHH15476.1 | SAMN05444372_10170 | SAMN05444372_11815 | Pimeloyl-ACP methyl ester carboxylesterase. | Isochorismate synthase. | 0.535 |
SHF89268.1 | menD | SAMN05444372_10170 | SAMN05444372_103198 | Pimeloyl-ACP methyl ester carboxylesterase. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.596 |
SHF95423.1 | SHG29749.1 | SAMN05444372_101315 | SAMN05444372_104170 | Pimeloyl-ACP methyl ester carboxylesterase. | O-succinylbenzoic acid--CoA ligase. | 0.479 |
SHF95423.1 | menD | SAMN05444372_101315 | SAMN05444372_103198 | Pimeloyl-ACP methyl ester carboxylesterase. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.802 |
SHG21607.1 | SHF89268.1 | SAMN05444372_103217 | SAMN05444372_10170 | O-succinylbenzoate synthase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.534 |
SHG21607.1 | SHG29749.1 | SAMN05444372_103217 | SAMN05444372_104170 | O-succinylbenzoate synthase. | O-succinylbenzoic acid--CoA ligase. | 0.992 |
SHG21607.1 | SHH15476.1 | SAMN05444372_103217 | SAMN05444372_11815 | O-succinylbenzoate synthase. | Isochorismate synthase. | 0.722 |
SHG21607.1 | menA | SAMN05444372_103217 | SAMN05444372_103213 | O-succinylbenzoate synthase. | 1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.795 |
SHG21607.1 | menB | SAMN05444372_103217 | SAMN05444372_103210 | O-succinylbenzoate synthase. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.862 |
SHG21607.1 | menD | SAMN05444372_103217 | SAMN05444372_103198 | O-succinylbenzoate synthase. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.949 |
SHG29749.1 | SHF89268.1 | SAMN05444372_104170 | SAMN05444372_10170 | O-succinylbenzoic acid--CoA ligase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.562 |
SHG29749.1 | SHF95423.1 | SAMN05444372_104170 | SAMN05444372_101315 | O-succinylbenzoic acid--CoA ligase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.479 |
SHG29749.1 | SHG21607.1 | SAMN05444372_104170 | SAMN05444372_103217 | O-succinylbenzoic acid--CoA ligase. | O-succinylbenzoate synthase. | 0.992 |
SHG29749.1 | SHG95434.1 | SAMN05444372_104170 | SAMN05444372_11222 | O-succinylbenzoic acid--CoA ligase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.479 |
SHG29749.1 | SHH09947.1 | SAMN05444372_104170 | SAMN05444372_1152 | O-succinylbenzoic acid--CoA ligase. | L-alanine-DL-glutamate epimerase. | 0.616 |
SHG29749.1 | SHH15446.1 | SAMN05444372_104170 | SAMN05444372_11814 | O-succinylbenzoic acid--CoA ligase. | Uncharacterized domain 1-containing protein. | 0.536 |
SHG29749.1 | SHH15476.1 | SAMN05444372_104170 | SAMN05444372_11815 | O-succinylbenzoic acid--CoA ligase. | Isochorismate synthase. | 0.770 |
SHG29749.1 | menA | SAMN05444372_104170 | SAMN05444372_103213 | O-succinylbenzoic acid--CoA ligase. | 1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.788 |
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