STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG49800.1Phage shock protein C (PspC) family protein. (75 aa)    
Predicted Functional Partners:
SHG22078.1
PAS domain S-box-containing protein.
   
 
 0.999
SHG17441.1
PAS domain S-box-containing protein.
   
 
 0.999
SHG29429.1
PAS domain S-box-containing protein.
   
 
 0.932
SHG08752.1
His Kinase A (phospho-acceptor) domain-containing protein.
   
   0.724
SHG91949.1
Putative membrane protein.
  
    0.718
SHG40761.1
PAS domain S-box-containing protein.
   
   0.714
SHG10159.1
Hypothetical protein.
  
     0.686
SHG49771.1
Protein of unknown function.
       0.602
SHF92521.1
4-hydroxybenzoate polyprenyltransferase.
  
     0.543
SHF98107.1
Hypothetical protein.
  
     0.538
Your Current Organism:
Flavobacterium micromati
NCBI taxonomy Id: 229205
Other names: CIP 108161, DSM 17659, F. micromati, Flavobacterium micromati Van Trappen et al. 2004, LMG 21919, LMG:21919
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.