Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG35153.1 | SHG63163.1 | SAMN05444372_10526 | SAMN05444372_10834 | Acyl carrier protein. | seryl-tRNA synthetase. | 0.789 |
SHG35153.1 | SHH12240.1 | SAMN05444372_10526 | SAMN05444372_11618 | Acyl carrier protein. | Amino acid adenylation domain-containing protein. | 0.949 |
SHG35153.1 | SHH12269.1 | SAMN05444372_10526 | SAMN05444372_11619 | Acyl carrier protein. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.949 |
SHG35153.1 | SHH12320.1 | SAMN05444372_10526 | SAMN05444372_11621 | Acyl carrier protein. | Amino acid adenylation domain-containing protein. | 0.949 |
SHG63163.1 | SHG35153.1 | SAMN05444372_10834 | SAMN05444372_10526 | seryl-tRNA synthetase. | Acyl carrier protein. | 0.789 |
SHG63163.1 | SHH12240.1 | SAMN05444372_10834 | SAMN05444372_11618 | seryl-tRNA synthetase. | Amino acid adenylation domain-containing protein. | 0.812 |
SHG63163.1 | SHH12269.1 | SAMN05444372_10834 | SAMN05444372_11619 | seryl-tRNA synthetase. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.812 |
SHG63163.1 | SHH12320.1 | SAMN05444372_10834 | SAMN05444372_11621 | seryl-tRNA synthetase. | Amino acid adenylation domain-containing protein. | 0.812 |
SHG63163.1 | acpP | SAMN05444372_10834 | SAMN05444372_101363 | seryl-tRNA synthetase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.789 |
SHG63163.1 | alaS | SAMN05444372_10834 | SAMN05444372_1099 | seryl-tRNA synthetase. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.767 |
SHG63163.1 | argS | SAMN05444372_10834 | SAMN05444372_11284 | seryl-tRNA synthetase. | arginyl-tRNA synthetase. | 0.785 |
SHG63163.1 | lysS | SAMN05444372_10834 | SAMN05444372_102329 | seryl-tRNA synthetase. | lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.795 |
SHG63163.1 | pheS | SAMN05444372_10834 | SAMN05444372_101420 | seryl-tRNA synthetase. | phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. | 0.846 |
SHG63163.1 | rsmA | SAMN05444372_10834 | SAMN05444372_10838 | seryl-tRNA synthetase. | 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.785 |
SHH12240.1 | SHG35153.1 | SAMN05444372_11618 | SAMN05444372_10526 | Amino acid adenylation domain-containing protein. | Acyl carrier protein. | 0.949 |
SHH12240.1 | SHG63163.1 | SAMN05444372_11618 | SAMN05444372_10834 | Amino acid adenylation domain-containing protein. | seryl-tRNA synthetase. | 0.812 |
SHH12240.1 | SHH12269.1 | SAMN05444372_11618 | SAMN05444372_11619 | Amino acid adenylation domain-containing protein. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
SHH12240.1 | SHH12320.1 | SAMN05444372_11618 | SAMN05444372_11621 | Amino acid adenylation domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.999 |
SHH12240.1 | acpP | SAMN05444372_11618 | SAMN05444372_101363 | Amino acid adenylation domain-containing protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.949 |
SHH12269.1 | SHG35153.1 | SAMN05444372_11619 | SAMN05444372_10526 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Acyl carrier protein. | 0.949 |
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