Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A1C3YIH0 | A0A1C3YJG0 | A0A1C3YIH0 | A0A1C3YJG0 | Uncharacterized protein. | UPF0020 domain-containing protein. | 0.658 |
A0A1C3YIH0 | ERB1 | A0A1C3YIH0 | V6R227 | Uncharacterized protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.635 |
A0A1C3YIH0 | FG00732.1 | A0A1C3YIH0 | I1RB27 | Uncharacterized protein. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.653 |
A0A1C3YIH0 | FG01601.1 | A0A1C3YIH0 | I1S558 | Uncharacterized protein. | Uncharacterized protein. | 0.941 |
A0A1C3YIH0 | FG05964.1 | A0A1C3YIH0 | I1RPJ3 | Uncharacterized protein. | Uncharacterized protein. | 0.703 |
A0A1C3YIH0 | FG06826.1 | A0A1C3YIH0 | A0A098DRZ5 | Uncharacterized protein. | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. | 0.700 |
A0A1C3YIH0 | FG07452.1 | A0A1C3YIH0 | I1RTE9 | Uncharacterized protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.685 |
A0A1C3YIH0 | FG08666.1 | A0A1C3YIH0 | I1RWJ4 | Uncharacterized protein. | Uncharacterized protein. | 0.912 |
A0A1C3YIH0 | FG09300.1 | A0A1C3YIH0 | I1RY63 | Uncharacterized protein. | Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. | 0.672 |
A0A1C3YIH0 | FG10860.1 | A0A1C3YIH0 | I1S274 | Uncharacterized protein. | TRAM domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.635 |
A0A1C3YJG0 | A0A1C3YIH0 | A0A1C3YJG0 | A0A1C3YIH0 | UPF0020 domain-containing protein. | Uncharacterized protein. | 0.658 |
A0A1C3YJG0 | ERB1 | A0A1C3YJG0 | V6R227 | UPF0020 domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.416 |
A0A1C3YJG0 | FG00732.1 | A0A1C3YJG0 | I1RB27 | UPF0020 domain-containing protein. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.604 |
A0A1C3YJG0 | FG01601.1 | A0A1C3YJG0 | I1S558 | UPF0020 domain-containing protein. | Uncharacterized protein. | 0.717 |
A0A1C3YJG0 | FG05964.1 | A0A1C3YJG0 | I1RPJ3 | UPF0020 domain-containing protein. | Uncharacterized protein. | 0.770 |
A0A1C3YJG0 | FG06826.1 | A0A1C3YJG0 | A0A098DRZ5 | UPF0020 domain-containing protein. | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. | 0.770 |
A0A1C3YJG0 | FG07452.1 | A0A1C3YJG0 | I1RTE9 | UPF0020 domain-containing protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.574 |
A0A1C3YJG0 | FG08666.1 | A0A1C3YJG0 | I1RWJ4 | UPF0020 domain-containing protein. | Uncharacterized protein. | 0.595 |
A0A1C3YJG0 | FG09300.1 | A0A1C3YJG0 | I1RY63 | UPF0020 domain-containing protein. | Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. | 0.703 |
A0A1C3YJG0 | FG10860.1 | A0A1C3YJG0 | I1S274 | UPF0020 domain-containing protein. | TRAM domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.497 |
page 1 of 6