Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g10469RRM domain-containing protein. (879 aa)    
Predicted Functional Partners:
ACN38_g921
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
  0.955
ACN38_g7992
Protein kinase domain-containing protein.
   
 
 0.941
ACN38_g7762
Uncharacterized protein.
    
 0.893
ACN38_g5528
DNA helicase; Belongs to the MCM family.
   
    0.889
ACN38_g6566
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
 
 0.803
ACN38_g876
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
 
 0.803
ACN38_g2126
PUM-HD domain-containing protein.
    
 
 0.644
ACN38_g5103
E3 ubiquitin-protein ligase.
    
   0.634
ACN38_g10545
SF3b1 domain-containing protein.
    
 0.621
ACN38_g5452
Uncharacterized protein.
    
 
 0.616
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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