Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g10451Uncharacterized protein. (1123 aa)    
Predicted Functional Partners:
ACN38_g7711
Uncharacterized protein.
    
 
 0.949
ACN38_g9283
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 
 0.928
ACN38_g7238
BRCT domain-containing protein.
   
 
 0.907
ACN38_g4435
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 
 0.898
ACN38_g10261
Uncharacterized protein.
   
 
 0.898
ACN38_g5355
Histone H2A; Belongs to the histone H2A family.
    
 
 0.887
ACN38_g2531
Uncharacterized protein.
   
   0.884
ACN38_g8308
Iso_dh domain-containing protein.
   
   0.876
ACN38_g5486
DNA_MISMATCH_REPAIR_2 domain-containing protein.
   
 
 0.863
ACN38_g8251
Uncharacterized protein.
    
 
 0.846
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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