ACN38_g11785 protein (Penicillium nordicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ACN38_g11785

Uncharacterized protein. (223 aa)

Predicted Functional Partners:

ACN38_g9758

0.911

ACN38_g155

0.908

ACN38_g10757

0.898

ACN38_g9368

0.898

ACN38_g3650

0.898

ACN38_g1951

0.897

ACN38_g6702

0.897

ACN38_g3618

0.896

ACN38_g5259

0.896

RPS0

0.896

Your Current Organism:

Penicillium nordicum

NCBI taxonomy Id: 229535
Other names: P. nordicum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN38_g10757	ACN38_g11785	A0A0M8NTH8	A0A0M8NZA2	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.898
ACN38_g10757	ACN38_g155	A0A0M8NTH8	A0A0M8PBC3	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.999
ACN38_g10757	ACN38_g1951	A0A0M8NTH8	A0A0M8PEQ9	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.998
ACN38_g10757	ACN38_g3618	A0A0M8NTH8	A0A0M8P828	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
ACN38_g10757	ACN38_g3650	A0A0M8NTH8	A0A0M9WHT5	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Ribosomal_L18_c domain-containing protein.	0.998
ACN38_g10757	ACN38_g5259	A0A0M8NTH8	A0A0M8P934	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
ACN38_g10757	ACN38_g6702	A0A0M8NTH8	A0A0M9WF25	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Ribosomal_L2_C domain-containing protein.	0.998
ACN38_g10757	ACN38_g9368	A0A0M8NTH8	A0A0M9WCL4	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Ribosomal_L23eN domain-containing protein.	0.998
ACN38_g10757	ACN38_g9758	A0A0M8NTH8	A0A0M9WC94	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	0.999
ACN38_g10757	RPS0	A0A0M8NTH8	A0A0M8P935	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.999
ACN38_g11785	ACN38_g10757	A0A0M8NZA2	A0A0M8NTH8	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.898
ACN38_g11785	ACN38_g155	A0A0M8NZA2	A0A0M8PBC3	Uncharacterized protein.	Uncharacterized protein.	0.908
ACN38_g11785	ACN38_g1951	A0A0M8NZA2	A0A0M8PEQ9	Uncharacterized protein.	Uncharacterized protein.	0.897
ACN38_g11785	ACN38_g3618	A0A0M8NZA2	A0A0M8P828	Uncharacterized protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.896
ACN38_g11785	ACN38_g3650	A0A0M8NZA2	A0A0M9WHT5	Uncharacterized protein.	Ribosomal_L18_c domain-containing protein.	0.898
ACN38_g11785	ACN38_g5259	A0A0M8NZA2	A0A0M8P934	Uncharacterized protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.896
ACN38_g11785	ACN38_g6702	A0A0M8NZA2	A0A0M9WF25	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.897
ACN38_g11785	ACN38_g9368	A0A0M8NZA2	A0A0M9WCL4	Uncharacterized protein.	Ribosomal_L23eN domain-containing protein.	0.898
ACN38_g11785	ACN38_g9758	A0A0M8NZA2	A0A0M9WC94	Uncharacterized protein.	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	0.911
ACN38_g11785	RPS0	A0A0M8NZA2	A0A0M8P935	Uncharacterized protein.	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.896