ACN38_g6267 protein (Penicillium nordicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ACN38_g6267

AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (184 aa)

Predicted Functional Partners:

ACN38_g12628

0.998

ACN38_g307

0.998

ACN38_g8544

0.997

ACN38_g11391

0.958

ACN38_g883

0.958

ACN38_g2175

0.939

ACN38_g9802

0.885

ACN38_g6268

0.832

ACN38_g5793

0.826

ACN38_g746

0.728

Your Current Organism:

Penicillium nordicum

NCBI taxonomy Id: 229535
Other names: P. nordicum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN38_g11391	ACN38_g12628	A0A0M8NSE8	A0A0M8NSW9	CFEM domain-containing protein.	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	0.973
ACN38_g11391	ACN38_g2175	A0A0M8NSE8	A0A0M9WJ55	CFEM domain-containing protein.	AP-1 complex subunit gamma.	0.796
ACN38_g11391	ACN38_g5793	A0A0M8NSE8	A0A0M9WFW3	CFEM domain-containing protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.457
ACN38_g11391	ACN38_g6267	A0A0M8NSE8	A0A0M8P079	CFEM domain-containing protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.958
ACN38_g11391	ACN38_g746	A0A0M8NSE8	A0A0M8PGS5	CFEM domain-containing protein.	CDC73_C domain-containing protein.	0.440
ACN38_g11391	ACN38_g8544	A0A0M8NSE8	A0A0M8NX02	CFEM domain-containing protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.963
ACN38_g11391	ACN38_g9802	A0A0M8NSE8	A0A0M8NV34	CFEM domain-containing protein.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.701
ACN38_g12628	ACN38_g11391	A0A0M8NSW9	A0A0M8NSE8	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	CFEM domain-containing protein.	0.973
ACN38_g12628	ACN38_g2175	A0A0M8NSW9	A0A0M9WJ55	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	AP-1 complex subunit gamma.	0.628
ACN38_g12628	ACN38_g307	A0A0M8NSW9	A0A0N0S049	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	Adaptin_N domain-containing protein.	0.999
ACN38_g12628	ACN38_g5793	A0A0M8NSW9	A0A0M9WFW3	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.814
ACN38_g12628	ACN38_g6267	A0A0M8NSW9	A0A0M8P079	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.998
ACN38_g12628	ACN38_g746	A0A0M8NSW9	A0A0M8PGS5	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	CDC73_C domain-containing protein.	0.576
ACN38_g12628	ACN38_g8544	A0A0M8NSW9	A0A0M8NX02	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.999
ACN38_g12628	ACN38_g883	A0A0M8NSW9	A0A0M8PGF5	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	CFEM domain-containing protein.	0.973
ACN38_g12628	ACN38_g9802	A0A0M8NSW9	A0A0M8NV34	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.701
ACN38_g2175	ACN38_g11391	A0A0M9WJ55	A0A0M8NSE8	AP-1 complex subunit gamma.	CFEM domain-containing protein.	0.796
ACN38_g2175	ACN38_g12628	A0A0M9WJ55	A0A0M8NSW9	AP-1 complex subunit gamma.	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	0.628
ACN38_g2175	ACN38_g307	A0A0M9WJ55	A0A0N0S049	AP-1 complex subunit gamma.	Adaptin_N domain-containing protein.	0.923
ACN38_g2175	ACN38_g5793	A0A0M9WJ55	A0A0M9WFW3	AP-1 complex subunit gamma.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.998