Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g5722G-patch domain-containing protein. (197 aa)    
Predicted Functional Partners:
ACN38_g253
Uncharacterized protein.
    
 0.815
ACN38_g6590
RNA helicase.
   
  0.740
ACN38_g12631
G-patch domain-containing protein.
    
 
 0.736
ACN38_g3424
Uncharacterized protein.
  
 0.701
ACN38_g12673
Uncharacterized protein.
   
   0.648
ACN38_g724
KH domain-containing protein.
   
   0.648
ACN38_g5328
U3 small nucleolar RNA-associated protein 22.
    
 
 0.642
ACN38_g10784
Uncharacterized protein.
    
   0.641
ACN38_g9416
Uncharacterized protein.
    
   0.641
ACN38_g6208
Uncharacterized protein.
    
   0.641
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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