STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g7245CBFD_NFYB_HMF domain-containing protein. (142 aa)    
Predicted Functional Partners:
ACN38_g6983
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.988
tbp1
TATA-box-binding protein.
    
 
 0.982
ACN38_g5969
SGF29 C-terminal domain-containing protein.
    
 0.924
ACN38_g6365
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.921
ACN38_g9836
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.916
ACN38_g2196
Uncharacterized protein.
    
 
 0.914
ACN38_g10046
Uncharacterized protein.
    
 0.888
ACN38_g11071
Uncharacterized protein.
    
 0.743
ACN38_g1712
Uncharacterized protein.
    
 0.743
ACN38_g7388
Uncharacterized protein.
    
 0.743
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.