ACN38_g9494 protein (Penicillium nordicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ACN38_g9494

Uncharacterized protein. (1383 aa)

Predicted Functional Partners:

ACN38_g4426

0.705

ACN38_g9420

0.699

ACN38_g7484

0.669

ACN38_g6533

0.659

ACN38_g6550

0.632

ACN38_g6549

0.632

ACN38_g3828

0.593

ACN38_g3829

0.593

ACN38_g11975

0.577

ACN38_g9564

0.577

Your Current Organism:

Penicillium nordicum

NCBI taxonomy Id: 229535
Other names: P. nordicum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN38_g11975	ACN38_g3828	A0A0M8NQC9	A0A0M8PBI4	BZIP domain-containing protein.	Uncharacterized protein.	0.885
ACN38_g11975	ACN38_g3829	A0A0M8NQC9	A0A0M9WHM5	BZIP domain-containing protein.	Uncharacterized protein.	0.885
ACN38_g11975	ACN38_g4426	A0A0M8NQC9	A0A0M8P3G3	BZIP domain-containing protein.	Uncharacterized protein.	0.904
ACN38_g11975	ACN38_g6533	A0A0M8NQC9	A0A0M9WFD1	BZIP domain-containing protein.	Cytochrome c oxidase subunit 6A, mitochondrial.	0.913
ACN38_g11975	ACN38_g6549	A0A0M8NQC9	A0A0N0RYQ0	BZIP domain-containing protein.	Myb-like domain-containing protein.	0.857
ACN38_g11975	ACN38_g6550	A0A0M8NQC9	A0A0M9WF88	BZIP domain-containing protein.	Uncharacterized protein.	0.857
ACN38_g11975	ACN38_g7484	A0A0M8NQC9	A0A0M8P6D5	BZIP domain-containing protein.	Uncharacterized protein.	0.890
ACN38_g11975	ACN38_g9420	A0A0M8NQC9	A0A0M9WCK7	BZIP domain-containing protein.	Uncharacterized protein.	0.885
ACN38_g11975	ACN38_g9494	A0A0M8NQC9	A0A0M8P201	BZIP domain-containing protein.	Uncharacterized protein.	0.577
ACN38_g3828	ACN38_g11975	A0A0M8PBI4	A0A0M8NQC9	Uncharacterized protein.	BZIP domain-containing protein.	0.885
ACN38_g3828	ACN38_g4426	A0A0M8PBI4	A0A0M8P3G3	Uncharacterized protein.	Uncharacterized protein.	0.997
ACN38_g3828	ACN38_g6533	A0A0M8PBI4	A0A0M9WFD1	Uncharacterized protein.	Cytochrome c oxidase subunit 6A, mitochondrial.	0.997
ACN38_g3828	ACN38_g6549	A0A0M8PBI4	A0A0N0RYQ0	Uncharacterized protein.	Myb-like domain-containing protein.	0.994
ACN38_g3828	ACN38_g6550	A0A0M8PBI4	A0A0M9WF88	Uncharacterized protein.	Uncharacterized protein.	0.994
ACN38_g3828	ACN38_g7484	A0A0M8PBI4	A0A0M8P6D5	Uncharacterized protein.	Uncharacterized protein.	0.998
ACN38_g3828	ACN38_g9420	A0A0M8PBI4	A0A0M9WCK7	Uncharacterized protein.	Uncharacterized protein.	0.995
ACN38_g3828	ACN38_g9494	A0A0M8PBI4	A0A0M8P201	Uncharacterized protein.	Uncharacterized protein.	0.593
ACN38_g3828	ACN38_g9564	A0A0M8PBI4	A0A0M8NVG0	Uncharacterized protein.	Uncharacterized protein.	0.885
ACN38_g3829	ACN38_g11975	A0A0M9WHM5	A0A0M8NQC9	Uncharacterized protein.	BZIP domain-containing protein.	0.885
ACN38_g3829	ACN38_g4426	A0A0M9WHM5	A0A0M8P3G3	Uncharacterized protein.	Uncharacterized protein.	0.998