Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g9483Uncharacterized protein. (822 aa)    
Predicted Functional Partners:
ACN38_g10636
Nuclear cap-binding protein subunit 2.
   
 0.999
ACN38_g4327
C2H2-type domain-containing protein.
   
 0.996
ACN38_g8673
Uncharacterized protein.
   
 0.989
ACN38_g3457
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.989
ACN38_g5250
Uncharacterized protein.
   
 0.986
ACN38_g4272
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.983
ACN38_g5452
Uncharacterized protein.
   
 0.983
ACN38_g5104
RRM domain-containing protein.
   
 0.983
ACN38_g7762
Uncharacterized protein.
    
 0.982
ACN38_g9533
Uncharacterized protein.
    
 0.982
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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