Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g10086Nop domain-containing protein. (514 aa)    
Predicted Functional Partners:
ACN38_g12941
PUA domain-containing protein.
   
 0.999
ACN38_g6734
Uncharacterized protein.
   
 0.999
ACN38_g6175
Nop domain-containing protein.
  
0.999
ACN38_g12593
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
ACN38_g3179
WD_REPEATS_REGION domain-containing protein.
   
 0.998
ACN38_g5426
Bms1-type G domain-containing protein.
   
 0.997
ACN38_g11156
WD_REPEATS_REGION domain-containing protein.
   
 0.997
ACN38_g3347
WD_REPEATS_REGION domain-containing protein.
   
 0.997
ACN38_g1234
Uncharacterized protein.
   
 
 0.996
ACN38_g3590
Utp12 domain-containing protein.
   
 0.996
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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