ACN38_g10022 protein (Penicillium nordicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ACN38_g10022

Nudix hydrolase domain-containing protein. (427 aa)

Predicted Functional Partners:

ACN38_g10021

0.815

ACN38_g11025

0.651

ACN38_g2118

0.609

ACN38_g1945

0.609

ACN38_g11507

0.608

ACN38_g764

0.606

ACN38_g6343

0.596

ACN38_g1543

0.596

ACN38_g11516

0.592

ACN38_g11038

0.589

Your Current Organism:

Penicillium nordicum

NCBI taxonomy Id: 229535
Other names: P. nordicum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN38_g10021	ACN38_g10022	A0A0M8P2M0	A0A0M8P274	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.815
ACN38_g10021	ACN38_g764	A0A0M8P2M0	A0A0M9WKF1	Uncharacterized protein.	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.	0.628
ACN38_g10022	ACN38_g10021	A0A0M8P274	A0A0M8P2M0	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.815
ACN38_g10022	ACN38_g11025	A0A0M8P274	A0A0M9WB39	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.651
ACN38_g10022	ACN38_g11038	A0A0M8P274	A0A0M8NT02	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.589
ACN38_g10022	ACN38_g11507	A0A0M8P274	A0A0M8P034	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.608
ACN38_g10022	ACN38_g11516	A0A0M8P274	A0A0M8P029	Nudix hydrolase domain-containing protein.	PAT1 domain-containing protein.	0.592
ACN38_g10022	ACN38_g1543	A0A0M8P274	A0A0M8PBL0	Nudix hydrolase domain-containing protein.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.	0.596
ACN38_g10022	ACN38_g1945	A0A0M8P274	A0A0M8PFI0	Nudix hydrolase domain-containing protein.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.609
ACN38_g10022	ACN38_g2118	A0A0M8P274	A0A0M8PEF4	Nudix hydrolase domain-containing protein.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.609
ACN38_g10022	ACN38_g6343	A0A0M8P274	A0A0M8P050	Nudix hydrolase domain-containing protein.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.	0.596
ACN38_g10022	ACN38_g764	A0A0M8P274	A0A0M9WKF1	Nudix hydrolase domain-containing protein.	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.	0.606
ACN38_g11025	ACN38_g10022	A0A0M9WB39	A0A0M8P274	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.651
ACN38_g11025	ACN38_g1945	A0A0M9WB39	A0A0M8PFI0	Uncharacterized protein.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.831
ACN38_g11025	ACN38_g2118	A0A0M9WB39	A0A0M8PEF4	Uncharacterized protein.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.831
ACN38_g11038	ACN38_g10022	A0A0M8NT02	A0A0M8P274	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.589
ACN38_g11507	ACN38_g10022	A0A0M8P034	A0A0M8P274	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.608
ACN38_g11507	ACN38_g11516	A0A0M8P034	A0A0M8P029	Uncharacterized protein.	PAT1 domain-containing protein.	0.982
ACN38_g11507	ACN38_g1543	A0A0M8P034	A0A0M8PBL0	Uncharacterized protein.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.	0.984
ACN38_g11507	ACN38_g6343	A0A0M8P034	A0A0M8P050	Uncharacterized protein.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.	0.960