Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g9268Brr6_like_C_C domain-containing protein. (439 aa)    
Predicted Functional Partners:
ACN38_g4421
Uncharacterized protein.
    
 
 0.804
ACN38_g12373
Nup188_C domain-containing protein.
    
 
 0.792
ACN38_g9443
Uncharacterized protein.
    
 
 0.758
ACN38_g9985
Nup54 domain-containing protein.
    
 
 0.693
ACN38_g5986
Uncharacterized protein.
    
 
 0.689
ACN38_g7984
SUN domain-containing protein.
    
 
 0.644
ACN38_g12159
WD_REPEATS_REGION domain-containing protein.
    
 
 0.534
ACN38_g5933
Uncharacterized protein.
    
 
 0.523
ACN38_g1759
Uncharacterized protein.
      
 0.518
ACN38_g8626
Reticulon-like protein.
      
 0.508
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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